LOC_Os05g35360.1

Description : beta-galactosidase 16

Gene families : OG_01_0000304 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000304_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os05g35360.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os05g35360.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_288
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_113

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0005975	carbohydrate metabolic process	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
MF	GO:0030246	carbohydrate binding	ISM	GOs from InterProScan
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR008979	Galactose-bd-like_sf	SUPERFAMILY	368	528
IPR041392	GHD	Pfam	338	384
IPR001944	Glycoside_Hdrlase_35	PANTHER	338	769
IPR001944	Glycoside_Hdrlase_35	PANTHER	17	336
IPR000922	Lectin_gal-bd_dom	Pfam	698	774
IPR019801	Glyco_hydro_35_CS	ProSitePatterns	174	186
IPR001944	Glycoside_Hdrlase_35	PRINTS	320	336
IPR001944	Glycoside_Hdrlase_35	PRINTS	608	624
IPR001944	Glycoside_Hdrlase_35	PRINTS	581	595
IPR001944	Glycoside_Hdrlase_35	PRINTS	301	316
IPR001944	Glycoside_Hdrlase_35	PRINTS	172	187
IPR001944	Glycoside_Hdrlase_35	PRINTS	115	134
IPR001944	Glycoside_Hdrlase_35	PRINTS	39	56
IPR001944	Glycoside_Hdrlase_35	PRINTS	60	78
IPR008979	Galactose-bd-like_sf	SUPERFAMILY	547	688
IPR017853	Glycoside_hydrolase_SF	SUPERFAMILY	25	335
IPR031330	Gly_Hdrlase_35_cat	Pfam	36	335
IPR025300	BetaGal_jelly_roll_dom	Pfam	584	659
IPR000922	Lectin_gal-bd_dom	ProSiteProfiles	693	775
IPR043159	Lectin_gal-bd_sf	Gene3D	690	775

HMM Family	HMM Length	Query Length	e-Value	Query Start	Query End
GH35	307	776	3.8e-99	36	335

External Links

No external refs found!