LOC_Os05g38570.1

Description : DHBP synthase RibB-like alpha/beta domain;GTP cyclohydrolase II

Gene families : OG_01_0000174 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000174_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os05g38570.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os05g38570.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_169
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_114

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003933	GTP cyclohydrolase activity	None	Extended
MF	GO:0003935	GTP cyclohydrolase II activity	ISM	GOs from InterProScan
BP	GO:0006766	vitamin metabolic process	None	Extended
BP	GO:0006767	water-soluble vitamin metabolic process	None	Extended
BP	GO:0006771	riboflavin metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008686	3,4-dihydroxy-2-butanone-4-phosphate synthase activity	ISM	GOs from InterProScan
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009110	vitamin biosynthetic process	None	Extended
BP	GO:0009231	riboflavin biosynthetic process	ISM	GOs from InterProScan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	None	Extended
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
MF	GO:0019238	cyclohydrolase activity	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042364	water-soluble vitamin biosynthetic process	None	Extended
BP	GO:0042726	flavin-containing compound metabolic process	None	Extended
BP	GO:0042727	flavin-containing compound biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000926	RibA	CDD	314	505
IPR016299	Riboflavin_synth_RibBA	Hamap	108	505
IPR000422	DHBP_synthase_RibB	TIGRFAM	109	308
IPR032677	GTP_cyclohydro_II	Pfam	321	483
IPR036144	RibA-like_sf	SUPERFAMILY	313	485
IPR000926	RibA	TIGRFAM	321	506
IPR000422	DHBP_synthase_RibB	Pfam	113	307
IPR017945	DHBP_synth_RibB-like_a/b_dom	SUPERFAMILY	109	315
IPR036144	RibA-like_sf	Gene3D	315	486
IPR000926	RibA	Hamap	313	509

No CAZYmes available for this sequence

External Links

No external refs found!

LOC_Os05g38570.1

Expression Profile

Co-expression Networks

Functional Annotation