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  5. LOC_Os05g40420.1

LOC_Os05g40420.1


Description : Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent


Gene families : OG_01_0001695 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001695_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os05g40420.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os05g40420.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_270
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_48


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity ISM GOs from InterProScan
MF GO:0004619 phosphoglycerate mutase activity ISM GOs from InterProScan
CC GO:0005737 cytoplasm ISM GOs from InterProScan
BP GO:0006007 glucose catabolic process ISM GOs from InterProScan
MF GO:0030145 manganese ion binding ISM GOs from InterProScan
MF GO:0046872 metal ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR006124 Metalloenzyme Pfam 20 545
IPR005995 Pgm_bpd_ind PANTHER 1 559
IPR005995 Pgm_bpd_ind PIRSF 15 557
IPR017850 Alkaline_phosphatase_core_sf SUPERFAMILY 20 548
IPR005995 Pgm_bpd_ind TIGRFAM 20 549
IPR036646 PGAM_B_sf SUPERFAMILY 96 331
IPR036646 PGAM_B_sf Gene3D 96 340
IPR005995 Pgm_bpd_ind CDD 20 554
IPR017850 Alkaline_phosphatase_core_sf Gene3D 22 546
IPR011258 BPG-indep_PGM_N Pfam 101 322

No CAZYmes available for this sequence

No external refs found!