LOC_Os05g41790.1

Description : Zinc finger C-x8-C-x5-C-x3-H type family protein

Gene families : OG_01_0001617 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001617_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os05g41790.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os05g41790.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_389
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_196

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	ISM	GOs from InterProScan

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000571	Znf_CCCH	ProSiteProfiles	119	146
IPR036855	Znf_CCCH_sf	SUPERFAMILY	119	144
IPR041367	Znf-CCCH_4	Pfam	123	143
IPR000571	Znf_CCCH	SMART	119	145

No CAZYmes available for this sequence

External Links

No external refs found!