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  5. LOC_Os05g43170.1

LOC_Os05g43170.1


Description : calreticulin 3


Gene families : OG_01_0006842 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006842_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os05g43170.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os05g43170.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_339
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_227


Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
CC GO:0005783 endoplasmic reticulum ISM GOs from InterProScan
BP GO:0006457 protein folding ISM GOs from InterProScan
MF GO:0051082 unfolded protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR013320 ConA-like_dom_sf SUPERFAMILY 23 225
IPR001580 Calret/calnex PRINTS 322 342
IPR001580 Calret/calnex PRINTS 134 150
IPR001580 Calret/calnex PRINTS 108 126
IPR001580 Calret/calnex PRINTS 251 273
IPR001580 Calret/calnex PRINTS 289 308
IPR001580 Calret/calnex PRINTS 223 236
IPR018124 Calret/calnex_CS ProSitePatterns 106 121
IPR009169 Calreticulin PIRSF 10 417
IPR009033 Calreticulin/calnexin_P_dom_sf Gene3D 203 322
IPR001580 Calret/calnex Pfam 268 341
IPR001580 Calret/calnex Pfam 31 266
IPR001580 Calret/calnex PANTHER 11 422
IPR009033 Calreticulin/calnexin_P_dom_sf SUPERFAMILY 209 324

No CAZYmes available for this sequence

No external refs found!