LOC_Os05g44170.1

Description : RNA ligase/cyclic nucleotide phosphodiesterase family protein

Gene families : OG_01_0012936 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012936_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os05g44170.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os05g44170.1	No neighbors in network
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_300

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004112	cyclic-nucleotide phosphodiesterase activity	ISM	GOs from InterProScan
MF	GO:0008081	phosphoric diester hydrolase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0042578	phosphoric ester hydrolase activity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR012386	Cyclic-nucl_3Pdiesterase	PIRSF	1	184
IPR012386	Cyclic-nucl_3Pdiesterase	PANTHER	1	185
IPR009097	Cyclic_Pdiesterase	SUPERFAMILY	6	183

No CAZYmes available for this sequence

External Links

No external refs found!