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  5. LOC_Os05g44540.1

LOC_Os05g44540.1


Description : BTB-POZ and MATH domain 1


Gene families : OG_01_0000278 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000278_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os05g44540.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os05g44540.1 No neighbors in network
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_107


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
BP GO:0016567 protein ubiquitination ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011333 SKP1/BTB/POZ_sf SUPERFAMILY 133 271
IPR008974 TRAF-like Gene3D 18 85
IPR002083 MATH/TRAF_dom CDD 16 117
IPR045005 BPM1-6 PANTHER 3 271
IPR000210 BTB/POZ_dom SMART 155 281
IPR000210 BTB/POZ_dom Pfam 147 231
IPR011333 SKP1/BTB/POZ_sf Gene3D 131 274
IPR000210 BTB/POZ_dom ProSiteProfiles 155 224

No CAZYmes available for this sequence

No external refs found!