LOC_Os05g45890.1

Description : tRNAHis guanylyltransferase

Gene families : OG_01_0005485 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005485_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os05g45890.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os05g45890.1	No neighbors in network
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_321

Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	ISM	GOs from InterProScan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006400	tRNA modification	ISM	GOs from InterProScan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008033	tRNA processing	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008192	RNA guanylyltransferase activity	None	Extended
MF	GO:0008193	tRNA guanylyltransferase activity	ISM	GOs from InterProScan
BP	GO:0009451	RNA modification	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016779	nucleotidyltransferase activity	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0070568	guanylyltransferase activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140101	catalytic activity, acting on a tRNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR024956	tRNAHis_GuaTrfase_cat	Pfam	6	136
IPR024956	tRNAHis_GuaTrfase_cat	Pfam	264	393
IPR038469	tRNAHis_GuaTrfase_Thg1_sf	Gene3D	261	515
IPR038469	tRNAHis_GuaTrfase_Thg1_sf	Gene3D	1	260
IPR007537	tRNAHis_GuaTrfase_Thg1	PANTHER	1	513
IPR025845	Thg1_C_dom	Pfam	139	223
IPR025845	Thg1_C_dom	Pfam	397	487

No CAZYmes available for this sequence

External Links

No external refs found!

LOC_Os05g45890.1

Expression Profile

Co-expression Networks

Functional Annotation