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  5. LOC_Os05g46290.1

LOC_Os05g46290.1


Description : heat shock protein 60-3A


Gene families : OG_01_0000308 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000308_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os05g46290.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os05g46290.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_54
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_71


Type GO Term Name Evidence Source
MF GO:0005524 ATP binding ISM GOs from InterProScan
BP GO:0006457 protein folding ISM GOs from InterProScan
MF GO:0016887 ATP hydrolysis activity ISM GOs from InterProScan
BP GO:0042026 protein refolding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR027410 TCP-1-like_intermed_sf SUPERFAMILY 175 242
IPR001844 Cpn60/GroEL CDD 41 555
IPR001844 Cpn60/GroEL PRINTS 387 412
IPR001844 Cpn60/GroEL PRINTS 64 90
IPR001844 Cpn60/GroEL PRINTS 435 456
IPR001844 Cpn60/GroEL PRINTS 305 328
IPR001844 Cpn60/GroEL PRINTS 120 147
IPR027410 TCP-1-like_intermed_sf Gene3D 174 447
IPR027409 GroEL-like_apical_dom_sf Gene3D 229 410
IPR018370 Chaperonin_Cpn60_CS ProSitePatterns 442 453
IPR001844 Cpn60/GroEL TIGRFAM 40 563
IPR027413 GROEL-like_equatorial_sf SUPERFAMILY 44 559
IPR001844 Cpn60/GroEL Hamap 39 579
IPR002423 Cpn60/GroEL/TCP-1 Pfam 60 559
IPR027413 GROEL-like_equatorial_sf Gene3D 43 560
IPR027409 GroEL-like_apical_dom_sf SUPERFAMILY 221 413

No CAZYmes available for this sequence

No external refs found!