LOC_Os05g46550.1

Description : Clathrin adaptor complexes medium subunit family protein

Gene families : OG_01_0011388 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011388_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os05g46550.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os05g46550.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_161
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_116

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	ISM	GOs from InterProScan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	ISM	GOs from InterProScan
CC	GO:0030119	AP-type membrane coat adaptor complex	None	Extended
CC	GO:0030131	clathrin adaptor complex	ISM	GOs from InterProScan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR028565	MHD	Pfam	161	428
IPR028565	MHD	ProSiteProfiles	172	428
IPR018240	Clathrin_mu_CS	ProSitePatterns	258	272
IPR011012	Longin-like_dom_sf	SUPERFAMILY	6	143
IPR036168	AP2_Mu_C_sf	SUPERFAMILY	161	428
IPR018240	Clathrin_mu_CS	ProSitePatterns	161	181
IPR001392	Clathrin_mu	PRINTS	163	191
IPR001392	Clathrin_mu	PRINTS	238	265
IPR001392	Clathrin_mu	PRINTS	105	132
IPR001392	Clathrin_mu	PRINTS	347	358
IPR001392	Clathrin_mu	PRINTS	16	36
IPR001392	Clathrin_mu	PRINTS	307	322
IPR022775	AP_mu_sigma_su	Pfam	7	128
IPR001392	Clathrin_mu	PIRSF	148	430
IPR001392	Clathrin_mu	PIRSF	5	155

No CAZYmes available for this sequence

External Links

No external refs found!