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  5. LOC_Os05g49260.1

LOC_Os05g49260.1


Description : Major facilitator superfamily protein


Gene families : OG_01_0000068 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000068_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os05g49260.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os05g49260.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_98
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_140


Type GO Term Name Evidence Source
BP GO:0008643 carbohydrate transport ISM GOs from InterProScan
CC GO:0016020 membrane ISM GOs from InterProScan
MF GO:0022857 transmembrane transporter activity ISM GOs from InterProScan
MF GO:0051119 sugar transmembrane transporter activity ISM GOs from InterProScan
BP GO:0055085 transmembrane transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036259 MFS_trans_sf SUPERFAMILY 62 493
IPR020846 MFS_dom ProSiteProfiles 66 485
IPR003663 Sugar/inositol_transpt PRINTS 304 314
IPR003663 Sugar/inositol_transpt PRINTS 398 419
IPR003663 Sugar/inositol_transpt PRINTS 74 84
IPR003663 Sugar/inositol_transpt PRINTS 421 433
IPR003663 Sugar/inositol_transpt PRINTS 157 176
IPR003663 Sugar/inositol_transpt TIGRFAM 54 492
IPR044775 MFS_ERD6/Tret1-like CDD 64 491
IPR005828 MFS_sugar_transport-like Pfam 66 493
IPR005829 Sugar_transporter_CS ProSitePatterns 162 187
IPR036259 MFS_trans_sf Gene3D 57 497
IPR005829 Sugar_transporter_CS ProSitePatterns 120 137

No CAZYmes available for this sequence

No external refs found!