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  5. LOC_Os05g49890.1

LOC_Os05g49890.1


Description : RAN GTPase 3


Gene families : OG_01_0000288 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000288_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os05g49890.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os05g49890.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_14
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_86


Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity ISM GOs from InterProScan
MF GO:0005525 GTP binding ISM GOs from InterProScan
BP GO:0006913 nucleocytoplasmic transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR027417 P-loop_NTPase SUPERFAMILY 14 186
IPR027417 P-loop_NTPase Gene3D 5 219
IPR002041 Ran_GTPase PRINTS 168 190
IPR002041 Ran_GTPase PRINTS 74 92
IPR002041 Ran_GTPase PRINTS 130 148
IPR002041 Ran_GTPase PRINTS 27 41
IPR002041 Ran_GTPase PRINTS 94 115
IPR001806 Small_GTPase Pfam 15 171
IPR005225 Small_GTP-bd_dom TIGRFAM 14 164
IPR002041 Ran_GTPase ProSiteProfiles 7 171
IPR001806 Small_GTPase ProSiteProfiles 5 205
IPR002041 Ran_GTPase PANTHER 1 221
IPR001806 Small_GTPase SMART 16 170

No CAZYmes available for this sequence

No external refs found!