1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os05g50900.1

LOC_Os05g50900.1


Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein


Gene families : OG_01_0013498 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0013498_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os05g50900.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os05g50900.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_260
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_105


Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011598 bHLH_dom Pfam 256 307
IPR002912 ACT_dom ProSiteProfiles 418 492
IPR011598 bHLH_dom SMART 261 312
IPR036638 HLH_DNA-bd_sf Gene3D 247 321
IPR011598 bHLH_dom ProSiteProfiles 255 306
IPR036638 HLH_DNA-bd_sf SUPERFAMILY 255 324

No CAZYmes available for this sequence

No external refs found!