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  5. Sevir.4G232900.1

Sevir.4G232900.1


Description : phospholipase D alpha 1


Gene families : OG_01_0008397 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008397_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.4G232900.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.4G232900.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_504
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_81


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity ISM GOs from InterProScan
MF GO:0004630 phospholipase D activity ISM GOs from InterProScan
MF GO:0005509 calcium ion binding ISM GOs from InterProScan
CC GO:0016020 membrane ISM GOs from InterProScan
BP GO:0046470 phosphatidylcholine metabolic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001736 PLipase_D/transphosphatidylase Pfam 664 690
IPR001736 PLipase_D/transphosphatidylase Pfam 334 372
IPR001736 PLipase_D/transphosphatidylase SMART 334 372
IPR001736 PLipase_D/transphosphatidylase SMART 663 690
IPR035892 C2_domain_sf SUPERFAMILY 6 154
IPR015679 PLipase_D_fam PANTHER 2 818
IPR000008 C2_dom ProSiteProfiles 1 130
IPR000008 C2_dom Pfam 8 131
IPR001736 PLipase_D/transphosphatidylase ProSiteProfiles 334 372
IPR000008 C2_dom SMART 9 129
IPR024632 PLipase_D_C Pfam 737 807
IPR011402 PLipase_D_pln PIRSF 1 818
IPR035892 C2_domain_sf Gene3D 6 160
IPR001736 PLipase_D/transphosphatidylase ProSiteProfiles 663 690

No CAZYmes available for this sequence

No external refs found!