1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os06g03570.2

LOC_Os06g03570.2


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_01_0009935 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009935_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os06g03570.2
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os06g03570.2
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_365
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_174


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011990 TPR-like_helical_dom_sf Gene3D 111 247
IPR002885 Pentatricopeptide_rpt TIGRFAM 289 321
IPR002885 Pentatricopeptide_rpt TIGRFAM 155 185
IPR002885 Pentatricopeptide_rpt TIGRFAM 185 220
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 163 452
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 152 186
IPR002885 Pentatricopeptide_rpt Pfam 289 318
IPR002885 Pentatricopeptide_rpt Pfam 126 149
IPR011990 TPR-like_helical_dom_sf Gene3D 257 485
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 286 320
IPR002885 Pentatricopeptide_rpt Pfam 151 179
IPR002885 Pentatricopeptide_rpt Pfam 182 231

No CAZYmes available for this sequence

No external refs found!