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  5. LOC_Os06g03770.1

LOC_Os06g03770.1


Description : ABC transporter of the mitochondrion 3


Gene families : OG_01_0004714 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004714_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os06g03770.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os06g03770.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_299
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_160


Type GO Term Name Evidence Source
MF GO:0005524 ATP binding ISM GOs from InterProScan
BP GO:0055085 transmembrane transport ISM GOs from InterProScan
MF GO:0140359 ABC-type transporter activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR039421 Type_1_exporter PANTHER 7 719
IPR036640 ABC1_TM_sf Gene3D 133 471
IPR027417 P-loop_NTPase Gene3D 473 731
IPR011527 ABC1_TM_dom Pfam 146 435
IPR011527 ABC1_TM_dom ProSiteProfiles 147 448
IPR036640 ABC1_TM_sf SUPERFAMILY 140 470
IPR003593 AAA+_ATPase SMART 507 693
IPR003439 ABC_transporter-like_ATP-bd Pfam 498 647
IPR017871 ABC_transporter-like_CS ProSitePatterns 619 633
IPR003439 ABC_transporter-like_ATP-bd ProSiteProfiles 482 716
IPR027417 P-loop_NTPase SUPERFAMILY 472 717

No CAZYmes available for this sequence

No external refs found!