LOC_Os06g03780.1

Description : embryo sac development arrest 7

Gene families : OG_01_0007449 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007449_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os06g03780.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os06g03780.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_60
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_163

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	GOs from InterProScan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR036322	WD40_repeat_dom_sf	SUPERFAMILY	16	342
IPR012580	NUC153	Pfam	501	527
IPR040382	NOL10/Enp2	PANTHER	8	667
IPR015943	WD40/YVTN_repeat-like_dom_sf	Gene3D	26	345
IPR001680	WD40_rpt	SMART	218	261
IPR001680	WD40_rpt	SMART	173	212
IPR001680	WD40_rpt	SMART	264	307

No CAZYmes available for this sequence

External Links

No external refs found!