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  5. LOC_Os06g04830.1

LOC_Os06g04830.1


Description : disease resistance family protein / LRR family protein


Gene families : OG_01_0000331 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000331_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os06g04830.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os06g04830.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_278
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_131


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR003591 Leu-rich_rpt_typical-subtyp SMART 830 853
IPR003591 Leu-rich_rpt_typical-subtyp SMART 567 590
IPR003591 Leu-rich_rpt_typical-subtyp SMART 105 130
IPR003591 Leu-rich_rpt_typical-subtyp SMART 329 352
IPR003591 Leu-rich_rpt_typical-subtyp SMART 230 253
IPR003591 Leu-rich_rpt_typical-subtyp SMART 664 688
IPR003591 Leu-rich_rpt_typical-subtyp SMART 353 377
IPR003591 Leu-rich_rpt_typical-subtyp SMART 254 278
IPR003591 Leu-rich_rpt_typical-subtyp SMART 806 829
IPR032675 LRR_dom_sf Gene3D 519 888
IPR001611 Leu-rich_rpt Pfam 331 389
IPR001611 Leu-rich_rpt Pfam 207 267
IPR032675 LRR_dom_sf Gene3D 37 325
IPR001611 Leu-rich_rpt Pfam 806 821
IPR001611 Leu-rich_rpt Pfam 105 121
IPR013210 LRR_N_plant-typ Pfam 39 76
IPR032675 LRR_dom_sf Gene3D 326 421
IPR032675 LRR_dom_sf Gene3D 422 518

No CAZYmes available for this sequence

No external refs found!