1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os06g04840.1

LOC_Os06g04840.1


Description : disease resistance family protein / LRR family protein


Gene families : OG_01_0000331 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000331_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os06g04840.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os06g04840.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_104
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_145


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR013210 LRR_N_plant-typ Pfam 30 68
IPR032675 LRR_dom_sf Gene3D 541 882
IPR032675 LRR_dom_sf Gene3D 317 538
IPR032675 LRR_dom_sf Gene3D 29 200
IPR032675 LRR_dom_sf Gene3D 201 316
IPR001611 Leu-rich_rpt Pfam 785 844
IPR001611 Leu-rich_rpt Pfam 97 113
IPR003591 Leu-rich_rpt_typical-subtyp SMART 296 323
IPR003591 Leu-rich_rpt_typical-subtyp SMART 494 517
IPR003591 Leu-rich_rpt_typical-subtyp SMART 683 707
IPR003591 Leu-rich_rpt_typical-subtyp SMART 831 852
IPR003591 Leu-rich_rpt_typical-subtyp SMART 783 806
IPR003591 Leu-rich_rpt_typical-subtyp SMART 372 396
IPR003591 Leu-rich_rpt_typical-subtyp SMART 248 272
IPR003591 Leu-rich_rpt_typical-subtyp SMART 97 122
IPR003591 Leu-rich_rpt_typical-subtyp SMART 324 347
IPR003591 Leu-rich_rpt_typical-subtyp SMART 610 633
IPR003591 Leu-rich_rpt_typical-subtyp SMART 807 830
IPR001611 Leu-rich_rpt Pfam 298 311

No CAZYmes available for this sequence

No external refs found!