LOC_Os06g05250.2

Description : Small GTP-binding protein

Gene families : OG_01_0003204 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003204_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os06g05250.2
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os06g05250.2
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_60
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_122

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	ISM	GOs from InterProScan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000640	EFG_V-like	Pfam	465	550
IPR038363	LepA_C_sf	Gene3D	544	618
IPR009000	Transl_B-barrel_sf	SUPERFAMILY	228	344
IPR027417	P-loop_NTPase	Gene3D	55	248
IPR000795	T_Tr_GTP-bd_dom	ProSiteProfiles	55	247
IPR006297	EF-4	PANTHER	49	658
IPR031157	G_TR_CS	ProSitePatterns	95	110
IPR000795	T_Tr_GTP-bd_dom	Pfam	56	245
IPR000795	T_Tr_GTP-bd_dom	PRINTS	189	198
IPR000795	T_Tr_GTP-bd_dom	PRINTS	137	147
IPR000795	T_Tr_GTP-bd_dom	PRINTS	59	72
IPR000795	T_Tr_GTP-bd_dom	PRINTS	102	110
IPR000795	T_Tr_GTP-bd_dom	PRINTS	153	164
IPR035654	LepA_IV	CDD	465	544
IPR005225	Small_GTP-bd_dom	TIGRFAM	59	233
IPR027417	P-loop_NTPase	SUPERFAMILY	52	264
IPR013842	LepA_CTD	Pfam	552	658
IPR006297	EF-4	TIGRFAM	56	659
IPR035647	EFG_III/V	SUPERFAMILY	356	433
IPR006297	EF-4	Hamap	53	663
IPR035647	EFG_III/V	SUPERFAMILY	464	558

No CAZYmes available for this sequence

External Links

No external refs found!