LOC_Os06g06030.1

Description : 20S proteasome beta subunit E1

Gene families : OG_01_0014131 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014131_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os06g06030.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os06g06030.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_85
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_184

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004298	threonine-type endopeptidase activity	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005839	proteasome core complex	ISM	GOs from InterProScan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	ISM	GOs from InterProScan
MF	GO:0070003	threonine-type peptidase activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR023333	Proteasome_suB-type	ProSiteProfiles	60	239
IPR029055	Ntn_hydrolases_N	Gene3D	61	272
IPR001353	Proteasome_sua/b	Pfam	58	239
IPR029055	Ntn_hydrolases_N	SUPERFAMILY	49	259
IPR016050	Proteasome_bsu_CS	ProSitePatterns	64	111
IPR000243	Pept_T1A_subB	PRINTS	225	236
IPR000243	Pept_T1A_subB	PRINTS	68	83
IPR000243	Pept_T1A_subB	PRINTS	200	211
IPR000243	Pept_T1A_subB	PRINTS	189	200

No CAZYmes available for this sequence

External Links

No external refs found!