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  5. LOC_Os06g08570.1

LOC_Os06g08570.1


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0014211 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014211_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os06g08570.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os06g08570.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_151
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_135


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002885 Pentatricopeptide_rpt TIGRFAM 253 286
IPR002885 Pentatricopeptide_rpt TIGRFAM 323 352
IPR002885 Pentatricopeptide_rpt TIGRFAM 221 251
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 216 250
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 321 355
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 251 285
IPR011990 TPR-like_helical_dom_sf Gene3D 194 380
IPR011990 TPR-like_helical_dom_sf Gene3D 49 191
IPR002885 Pentatricopeptide_rpt Pfam 215 262
IPR002885 Pentatricopeptide_rpt Pfam 319 348

No CAZYmes available for this sequence

No external refs found!