LOC_Os06g11320.1

Description : peptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamase

Gene families : OG_01_0002443 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002443_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os06g11320.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os06g11320.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_312
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_60

Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	ISM	GOs from InterProScan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	ISM	GOs from InterProScan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0006457	protein folding	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016853	isomerase activity	None	Extended
MF	GO:0016859	cis-trans isomerase activity	None	Extended
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018208	peptidyl-proline modification	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR002130	Cyclophilin-type_PPIase_dom	Pfam	30	193
IPR019734	TPR_repeat	SMART	320	353
IPR019734	TPR_repeat	SMART	234	267
IPR020892	Cyclophilin-type_PPIase_CS	ProSitePatterns	78	95
IPR002130	Cyclophilin-type_PPIase_dom	ProSiteProfiles	29	194
IPR002130	Cyclophilin-type_PPIase_dom	PRINTS	126	141
IPR002130	Cyclophilin-type_PPIase_dom	PRINTS	46	61
IPR002130	Cyclophilin-type_PPIase_dom	PRINTS	83	95
IPR002130	Cyclophilin-type_PPIase_dom	PRINTS	154	169
IPR002130	Cyclophilin-type_PPIase_dom	PRINTS	141	153
IPR011990	TPR-like_helical_dom_sf	SUPERFAMILY	231	375
IPR019734	TPR_repeat	ProSiteProfiles	320	353
IPR019734	TPR_repeat	Pfam	320	353
IPR011990	TPR-like_helical_dom_sf	Gene3D	230	384
IPR029000	Cyclophilin-like_dom_sf	Gene3D	14	201
IPR029000	Cyclophilin-like_dom_sf	SUPERFAMILY	19	198

No CAZYmes available for this sequence

External Links

No external refs found!