LOC_Os06g11500.1

Description : minichromosome maintenance 9

Gene families : OG_01_0006232 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006232_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os06g11500.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os06g11500.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_268
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_77

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
BP	GO:0032392	DNA geometric change	None	Extended
BP	GO:0032508	DNA duplex unwinding	ISM	GOs from InterProScan
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051276	chromosome organization	None	Extended
BP	GO:0071103	DNA conformation change	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR003593	AAA+_ATPase	SMART	360	509
IPR012340	NA-bd_OB-fold	SUPERFAMILY	45	268
IPR001208	MCM_dom	Pfam	320	523
IPR041562	MCM_lid	Pfam	544	625
IPR027417	P-loop_NTPase	SUPERFAMILY	328	628
IPR001208	MCM_dom	ProSiteProfiles	318	521
IPR033762	MCM_OB	Pfam	132	261
IPR031327	MCM	PANTHER	41	659
IPR001208	MCM_dom	PRINTS	495	503
IPR001208	MCM_dom	PRINTS	445	458
IPR001208	MCM_dom	PRINTS	417	431
IPR001208	MCM_dom	PRINTS	359	374
IPR031327	MCM	SMART	126	627
IPR027417	P-loop_NTPase	Gene3D	299	631
IPR027925	MCM_N	Pfam	48	100

No CAZYmes available for this sequence

External Links

No external refs found!