LOC_Os06g11990.1

Description : binding

Gene families : OG_01_0009364 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009364_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os06g11990.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os06g11990.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_155
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_119

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006109	regulation of carbohydrate metabolic process	None	Extended
MF	GO:0008017	microtubule binding	ISM	GOs from InterProScan
MF	GO:0008092	cytoskeletal protein binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0010330	cellulose synthase complex	ISM	GOs from InterProScan
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010962	regulation of glucan biosynthetic process	None	Extended
MF	GO:0015631	tubulin binding	None	Extended
BP	GO:0016049	cell growth	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032881	regulation of polysaccharide metabolic process	None	Extended
BP	GO:0032885	regulation of polysaccharide biosynthetic process	None	Extended
BP	GO:0032950	regulation of beta-glucan metabolic process	None	Extended
BP	GO:0032951	regulation of beta-glucan biosynthetic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0043255	regulation of carbohydrate biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051211	anisotropic cell growth	ISM	GOs from InterProScan
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended
BP	GO:2001006	regulation of cellulose biosynthetic process	ISM	GOs from InterProScan

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR011989	ARM-like	Gene3D	339	625
IPR035892	C2_domain_sf	SUPERFAMILY	1002	1122
IPR044297	CSI1/2/3	PANTHER	3	1125
IPR000008	C2_dom	SMART	1005	1101
IPR000008	C2_dom	ProSiteProfiles	985	1102
IPR000225	Armadillo	SMART	413	453
IPR000225	Armadillo	SMART	14	61
IPR000225	Armadillo	SMART	705	743
IPR000225	Armadillo	SMART	203	244
IPR000225	Armadillo	SMART	583	622
IPR000225	Armadillo	SMART	455	494
IPR000225	Armadillo	SMART	288	326
IPR000225	Armadillo	SMART	831	871
IPR000225	Armadillo	SMART	372	412
IPR011989	ARM-like	Gene3D	626	1002
IPR035892	C2_domain_sf	Gene3D	1003	1125
IPR011989	ARM-like	Gene3D	4	338
IPR016024	ARM-type_fold	SUPERFAMILY	553	1001
IPR016024	ARM-type_fold	SUPERFAMILY	52	625
IPR000008	C2_dom	Pfam	1004	1094

No CAZYmes available for this sequence

External Links

No external refs found!

LOC_Os06g11990.1

Expression Profile

Co-expression Networks

Functional Annotation