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  5. LOC_Os06g12150.1

LOC_Os06g12150.1


Description : shikimate kinase 1


Gene families : OG_01_0003242 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003242_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os06g12150.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os06g12150.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_219
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_135


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR031322 Shikimate/glucono_kinase Pfam 103 256
IPR000623 Shikimate_kinase/TSH1 Hamap 94 279
IPR027417 P-loop_NTPase SUPERFAMILY 95 252
IPR000623 Shikimate_kinase/TSH1 CDD 97 257
IPR023000 Shikimate_kinase_CS ProSitePatterns 151 176
IPR027417 P-loop_NTPase Gene3D 78 293

No CAZYmes available for this sequence

No external refs found!