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  5. LOC_Os06g17280.1

LOC_Os06g17280.1


Description : RING/U-box protein


Gene families : OG_01_0009272 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009272_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os06g17280.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os06g17280.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_356
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_105


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR019786 Zinc_finger_PHD-type_CS ProSitePatterns 118 161
IPR013083 Znf_RING/FYVE/PHD Gene3D 102 183
IPR011011 Znf_FYVE_PHD SUPERFAMILY 109 171
IPR001841 Znf_RING SMART 27 67
IPR001841 Znf_RING SMART 118 161
IPR001841 Znf_RING Pfam 26 68
IPR017907 Znf_RING_CS ProSitePatterns 45 54
IPR001965 Znf_PHD SMART 117 162
IPR019787 Znf_PHD-finger ProSiteProfiles 115 164
IPR019787 Znf_PHD-finger Pfam 118 163
IPR013083 Znf_RING/FYVE/PHD Gene3D 12 86
IPR001841 Znf_RING ProSiteProfiles 27 68

No CAZYmes available for this sequence

No external refs found!