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  5. LOC_Os06g19400.1

LOC_Os06g19400.1


Description : C2 calcium/lipid-binding and GRAM domain containing protein


Gene families : OG_01_0001083 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001083_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os06g19400.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os06g19400.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_238
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_226


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR004182 GRAM SMART 709 775
IPR004182 GRAM Pfam 710 787
IPR000008 C2_dom ProSiteProfiles 1 103
IPR031968 VASt ProSiteProfiles 870 1033
IPR011993 PH-like_dom_sf Gene3D 707 834
IPR035892 C2_domain_sf SUPERFAMILY 556 676
IPR035892 C2_domain_sf SUPERFAMILY 2 132
IPR044511 At1g03370/At5g50170-like PANTHER 1 1035
IPR031968 VASt ProSiteProfiles 271 443
IPR031968 VASt Pfam 875 1014
IPR031968 VASt Pfam 275 423
IPR035892 C2_domain_sf Gene3D 537 677
IPR035892 C2_domain_sf Gene3D 1 144
IPR000008 C2_dom Pfam 557 658
IPR000008 C2_dom Pfam 2 105
IPR000008 C2_dom ProSiteProfiles 538 656
IPR000008 C2_dom SMART 557 655
IPR000008 C2_dom SMART 2 99

No CAZYmes available for this sequence

No external refs found!