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  5. LOC_Os06g19730.1

LOC_Os06g19730.1


Description : proteasome activating protein 200


Gene families : OG_01_0004313 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004313_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os06g19730.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os06g19730.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_193
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_34


Type GO Term Name Evidence Source
MF GO:0016504 peptidase activator activity ISM GOs from InterProScan
MF GO:0070577 lysine-acetylated histone binding ISM GOs from InterProScan
MF GO:0070628 proteasome binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011989 ARM-like Gene3D 1285 1774
IPR021843 PSME4_C Pfam 1716 1801
IPR032430 Blm10_mid Pfam 507 814
IPR032430 Blm10_mid Pfam 309 493
IPR035309 PSME4 PANTHER 1 1801
IPR016024 ARM-type_fold SUPERFAMILY 961 1703
IPR016024 ARM-type_fold SUPERFAMILY 125 1082

No CAZYmes available for this sequence

No external refs found!