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  5. LOC_Os06g20020.1

LOC_Os06g20020.1


Description : C2H2-type zinc finger family protein


Gene families : OG_01_0030943 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0030943_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os06g20020.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os06g20020.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_104
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_28


Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR013087 Znf_C2H2_type ProSiteProfiles 285 312
IPR013087 Znf_C2H2_type ProSiteProfiles 113 140
IPR013087 Znf_C2H2_type ProSitePatterns 115 135
IPR044653 AZF1/2/3-like PANTHER 49 432
IPR013087 Znf_C2H2_type SMART 285 308
IPR013087 Znf_C2H2_type SMART 113 135
IPR036236 Znf_C2H2_sf SUPERFAMILY 114 307
IPR013087 Znf_C2H2_type ProSitePatterns 287 308

No CAZYmes available for this sequence

No external refs found!