LOC_Os06g20390.1

Description : hydroxyproline-rich glycoprotein family protein

Gene families : OG_01_0007369 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007369_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os06g20390.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os06g20390.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_193
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_105

Type	GO Term	Name	Evidence	Source
BP	GO:0006810	transport	None	Extended
BP	GO:0007034	vacuolar transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
BP	GO:0016197	endosomal transport	None	Extended
BP	GO:0032509	endosome transport via multivesicular body sorting pathway	None	Extended
BP	GO:0032511	late endosome to vacuole transport via multivesicular body sorting pathway	ISM	GOs from InterProScan
BP	GO:0045324	late endosome to vacuole transport	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0071985	multivesicular body sorting pathway	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR041212	Vta1_C	Pfam	445	481
IPR023175	Vta1/CALS_N_sf	Gene3D	5	152
IPR044538	Vta1-like	PANTHER	1	485
IPR039431	Vta1/CALS_N	Pfam	12	148

No CAZYmes available for this sequence

External Links

No external refs found!