LOC_Os06g21570.1

Description : beta glucosidase 13

Gene families : OG_01_0006293 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006293_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os06g21570.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os06g21570.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_204
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_44

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	ISM	GOs from InterProScan
BP	GO:0005975	carbohydrate metabolic process	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001360	Glyco_hydro_1	PRINTS	331	345
IPR001360	Glyco_hydro_1	PRINTS	451	468
IPR001360	Glyco_hydro_1	PRINTS	407	415
IPR001360	Glyco_hydro_1	PRINTS	430	441
IPR001360	Glyco_hydro_1	PRINTS	475	487
IPR001360	Glyco_hydro_1	Pfam	31	503
IPR001360	Glyco_hydro_1	PANTHER	26	503
IPR017853	Glycoside_hydrolase_SF	SUPERFAMILY	28	503
IPR033132	Glyco_hydro_1_N_CS	ProSitePatterns	37	51

HMM Family	HMM Length	Query Length	e-Value	Query Start	Query End
GH1	429	505	2e-180	30	503

External Links

No external refs found!