Sevir.4G247600.1

Description : GA requiring 3

Gene families : OG_01_0004725 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004725_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.4G247600.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.4G247600.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_54
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_29

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004497	monooxygenase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005506	iron ion binding	ISM	GOs from InterProScan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009685	gibberellin metabolic process	None	Extended
BP	GO:0009686	gibberellin biosynthetic process	ISM	GOs from InterProScan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010241	ent-kaurene oxidation to kaurenoic acid	ISM	GOs from InterProScan
BP	GO:0016053	organic acid biosynthetic process	None	Extended
BP	GO:0016101	diterpenoid metabolic process	None	Extended
BP	GO:0016102	diterpenoid biosynthetic process	None	Extended
BP	GO:0016114	terpenoid biosynthetic process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	ISM	GOs from InterProScan
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0020037	heme binding	ISM	GOs from InterProScan
BP	GO:0033331	ent-kaurene metabolic process	None	Extended
BP	GO:0042214	terpene metabolic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046906	tetrapyrrole binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0052615	ent-kaurene oxidase activity	ISM	GOs from InterProScan
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0120252	hydrocarbon metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR036396	Cyt_P450_sf	SUPERFAMILY	46	507
IPR002401	Cyt_P450_E_grp-I	PRINTS	74	93
IPR002401	Cyt_P450_E_grp-I	PRINTS	326	352
IPR002401	Cyt_P450_E_grp-I	PRINTS	368	386
IPR002401	Cyt_P450_E_grp-I	PRINTS	454	477
IPR002401	Cyt_P450_E_grp-I	PRINTS	409	433
IPR002401	Cyt_P450_E_grp-I	PRINTS	306	323
IPR002401	Cyt_P450_E_grp-I	PRINTS	98	119
IPR002401	Cyt_P450_E_grp-I	PRINTS	444	454
IPR001128	Cyt_P450	Pfam	46	487
IPR017972	Cyt_P450_CS	ProSitePatterns	447	456
IPR036396	Cyt_P450_sf	Gene3D	38	510
IPR001128	Cyt_P450	PRINTS	317	334
IPR001128	Cyt_P450	PRINTS	445	454
IPR001128	Cyt_P450	PRINTS	369	380
IPR044225	KO_chloroplastic	PANTHER	1	509

No CAZYmes available for this sequence

External Links

No external refs found!

Sevir.4G247600.1

Expression Profile

Co-expression Networks

Functional Annotation