LOC_Os06g29020.1

Description : sequence-specific DNA binding transcription factors;sequence-specific DNA binding

Gene families : OG_01_0004651 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004651_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os06g29020.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os06g29020.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_356
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_229

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0003682	chromatin binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0044877	protein-containing complex binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001356	Homeobox_dom	SMART	7	81
IPR009057	Homeobox-like_sf	SUPERFAMILY	12	78
IPR032001	SAWADEE_dom	Pfam	126	253
IPR001356	Homeobox_dom	ProSiteProfiles	13	77
IPR039276	SHH1/2	PANTHER	1	361
IPR001356	Homeobox_dom	Pfam	13	75

No CAZYmes available for this sequence

External Links

No external refs found!