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  5. LOC_Os06g32720.1

LOC_Os06g32720.1


Description : Zinc finger C-x8-C-x5-C-x3-H type family protein


Gene families : OG_01_0009230 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009230_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os06g32720.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os06g32720.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_171
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_147


Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000571 Znf_CCCH SMART 79 106
IPR000571 Znf_CCCH SMART 120 147
IPR000571 Znf_CCCH SMART 186 213
IPR000571 Znf_CCCH ProSiteProfiles 186 214
IPR000571 Znf_CCCH Pfam 125 147
IPR000571 Znf_CCCH Pfam 81 105
IPR000571 Znf_CCCH Pfam 188 212
IPR036855 Znf_CCCH_sf SUPERFAMILY 187 213
IPR036855 Znf_CCCH_sf SUPERFAMILY 122 150
IPR000571 Znf_CCCH ProSiteProfiles 120 148
IPR000571 Znf_CCCH ProSiteProfiles 79 107

No CAZYmes available for this sequence

No external refs found!