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  5. LOC_Os06g35030.3

LOC_Os06g35030.3


Description : CTC-interacting domain 9


Gene families : OG_01_0000927 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000927_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os06g35030.3
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os06g35030.3
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_342
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_138


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000504 RRM_dom SMART 275 346
IPR000504 RRM_dom SMART 178 248
IPR000504 RRM_dom ProSiteProfiles 274 350
IPR034823 CID8-like_RRM1 CDD 175 254
IPR035979 RBD_domain_sf SUPERFAMILY 266 356
IPR000504 RRM_dom Pfam 276 339
IPR000504 RRM_dom Pfam 179 241
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 259 357
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 134 253
IPR035979 RBD_domain_sf SUPERFAMILY 139 250
IPR000504 RRM_dom ProSiteProfiles 177 252

No CAZYmes available for this sequence

No external refs found!