LOC_Os06g37440.1

Description : Translation elongation factor EF1B, gamma chain

Gene families : OG_01_0008948 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008948_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os06g37440.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os06g37440.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_109
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_88

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003746	translation elongation factor activity	ISM	GOs from InterProScan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004364	glutathione transferase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0006414	translational elongation	ISM	GOs from InterProScan
BP	GO:0006749	glutathione metabolic process	ISM	GOs from InterProScan
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR004046	GST_C	Pfam	132	197
IPR010987	Glutathione-S-Trfase_C-like	ProSiteProfiles	87	215
IPR036433	EF1B_G_C_sf	Gene3D	256	416
IPR044628	EF-1-gamma_plant	PANTHER	1	416
IPR036249	Thioredoxin-like_sf	SUPERFAMILY	2	84
IPR001662	EF1B_G_C	SMART	255	363
IPR001662	EF1B_G_C	ProSiteProfiles	256	416
IPR036433	EF1B_G_C_sf	SUPERFAMILY	256	416
IPR004045	Glutathione_S-Trfase_N	ProSiteProfiles	1	82
IPR036282	Glutathione-S-Trfase_C_sf	SUPERFAMILY	73	215
IPR001662	EF1B_G_C	Pfam	255	363
IPR040079	Glutathione_S-Trfase	SFLD	5	193
IPR004045	Glutathione_S-Trfase_N	Pfam	10	76

No CAZYmes available for this sequence

External Links

No external refs found!