LOC_Os06g39240.1

Description : multiprotein bridging factor 1C

Gene families : OG_01_0016086 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0016086_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os06g39240.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os06g39240.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_54
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_49

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR010982	Lambda_DNA-bd_dom_sf	Gene3D	76	155
IPR001387	Cro/C1-type_HTH	CDD	88	140
IPR001387	Cro/C1-type_HTH	SMART	88	143
IPR001387	Cro/C1-type_HTH	Pfam	89	140
IPR010982	Lambda_DNA-bd_dom_sf	SUPERFAMILY	87	140
IPR001387	Cro/C1-type_HTH	ProSiteProfiles	89	143
IPR013729	MBF1_N	Pfam	12	81

No CAZYmes available for this sequence

External Links

No external refs found!