LOC_Os06g39708.1

Description : photosystem II reaction center protein B

Gene families : OG_01_0009693 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009693_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os06g39708.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os06g39708.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_12
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_79

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0009055	electron transfer activity	None	Extended
CC	GO:0009521	photosystem	ISM	GOs from InterProScan
CC	GO:0009523	photosystem II	ISM	GOs from InterProScan
BP	GO:0009767	photosynthetic electron transport chain	ISM	GOs from InterProScan
BP	GO:0009772	photosynthetic electron transport in photosystem II	ISM	GOs from InterProScan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015979	photosynthesis	ISM	GOs from InterProScan
CC	GO:0016020	membrane	ISM	GOs from InterProScan
MF	GO:0016168	chlorophyll binding	ISM	GOs from InterProScan
MF	GO:0016491	oxidoreductase activity	None	Extended
BP	GO:0019684	photosynthesis, light reaction	ISM	GOs from InterProScan
BP	GO:0022900	electron transport chain	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	ISM	GOs from InterProScan
MF	GO:0046906	tetrapyrrole binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR017486	PSII_PsbB	TIGRFAM	1	504
IPR017486	PSII_PsbB	Hamap	1	508
IPR000932	PS_antenna-like	Pfam	1	500
IPR036001	PS_II_antenna-like_sf	SUPERFAMILY	2	488
IPR000932	PS_antenna-like	PANTHER	1	506

No CAZYmes available for this sequence

External Links

No external refs found!