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  5. LOC_Os06g40170.1

LOC_Os06g40170.1


Description : phospholipase D alpha 1


Gene families : OG_01_0008397 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008397_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os06g40170.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os06g40170.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_110
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_103


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity ISM GOs from InterProScan
MF GO:0004630 phospholipase D activity ISM GOs from InterProScan
MF GO:0005509 calcium ion binding ISM GOs from InterProScan
CC GO:0016020 membrane ISM GOs from InterProScan
BP GO:0046470 phosphatidylcholine metabolic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001736 PLipase_D/transphosphatidylase Pfam 342 378
IPR001736 PLipase_D/transphosphatidylase Pfam 675 701
IPR015679 PLipase_D_fam PANTHER 4 831
IPR001736 PLipase_D/transphosphatidylase SMART 674 701
IPR001736 PLipase_D/transphosphatidylase SMART 339 378
IPR000008 C2_dom SMART 10 130
IPR024632 PLipase_D_C Pfam 749 820
IPR035892 C2_domain_sf Gene3D 5 160
IPR000008 C2_dom ProSiteProfiles 1 131
IPR000008 C2_dom Pfam 9 131
IPR035892 C2_domain_sf SUPERFAMILY 6 155
IPR011402 PLipase_D_pln PIRSF 1 830
IPR001736 PLipase_D/transphosphatidylase ProSiteProfiles 339 378
IPR001736 PLipase_D/transphosphatidylase ProSiteProfiles 674 701

No CAZYmes available for this sequence

No external refs found!