LOC_Os06g41730.1

Description : ARID/BRIGHT DNA-binding domain-containing protein

Gene families : OG_01_0001151 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001151_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os06g41730.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os06g41730.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_178
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_20

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	None	Extended
BP	GO:0006357	regulation of transcription by RNA polymerase II	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR008978	HSP20-like_chaperone	SUPERFAMILY	370	457
IPR001606	ARID_dom	ProSiteProfiles	164	255
IPR036431	ARID_dom_sf	Gene3D	164	264
IPR045147	ARI3A/B/C	PANTHER	28	460
IPR008978	HSP20-like_chaperone	Gene3D	356	461
IPR001606	ARID_dom	Pfam	167	251
IPR002068	A-crystallin/Hsp20_dom	Pfam	377	459
IPR036431	ARID_dom_sf	SUPERFAMILY	163	260
IPR001606	ARID_dom	SMART	165	256
IPR002068	A-crystallin/Hsp20_dom	ProSiteProfiles	361	461

No CAZYmes available for this sequence

External Links

No external refs found!