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  5. LOC_Os06g41750.1

LOC_Os06g41750.1


Description : CDC27 family protein


Gene families : OG_01_0003216 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003216_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os06g41750.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os06g41750.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_363
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_67


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011990 TPR-like_helical_dom_sf Gene3D 458 590
IPR013105 TPR_2 Pfam 102 132
IPR011990 TPR-like_helical_dom_sf Gene3D 2 156
IPR019734 TPR_repeat SMART 101 134
IPR019734 TPR_repeat SMART 493 526
IPR019734 TPR_repeat SMART 663 696
IPR019734 TPR_repeat SMART 425 458
IPR019734 TPR_repeat SMART 595 628
IPR019734 TPR_repeat SMART 629 662
IPR019734 TPR_repeat SMART 527 560
IPR019734 TPR_repeat SMART 561 594
IPR011990 TPR-like_helical_dom_sf Gene3D 591 694
IPR019734 TPR_repeat Pfam 532 559
IPR019734 TPR_repeat ProSiteProfiles 561 594
IPR011990 TPR-like_helical_dom_sf Gene3D 385 456
IPR019734 TPR_repeat ProSiteProfiles 493 526
IPR019734 TPR_repeat ProSiteProfiles 101 134
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 493 697
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 36 456
IPR019734 TPR_repeat ProSiteProfiles 527 560
IPR001440 TPR_1 Pfam 562 592
IPR019734 TPR_repeat ProSiteProfiles 663 696

No CAZYmes available for this sequence

No external refs found!