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  5. LOC_Os06g42810.1

LOC_Os06g42810.1


Description : plant UBX domain containing protein 4


Gene families : OG_01_0004500 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004500_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os06g42810.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os06g42810.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_378
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_85


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001012 UBX_dom Pfam 378 449
IPR012989 SEP_domain ProSiteProfiles 258 322
IPR029071 Ubiquitin-like_domsf SUPERFAMILY 331 449
IPR012989 SEP_domain SMART 255 348
IPR036241 NSFL1C_SEP_dom_sf Gene3D 258 320
IPR001012 UBX_dom ProSiteProfiles 374 450
IPR012989 SEP_domain Pfam 263 334
IPR036241 NSFL1C_SEP_dom_sf SUPERFAMILY 250 344
IPR001012 UBX_dom SMART 373 451
IPR009060 UBA-like_sf SUPERFAMILY 13 54

No CAZYmes available for this sequence

No external refs found!