LOC_Os06g46540.1

Description : anaphase-promoting complex subunit 8

Gene families : OG_01_0011601 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011601_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os06g46540.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os06g46540.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_160
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_210

Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	None	Extended
CC	GO:0000152	nuclear ubiquitin ligase complex	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005680	anaphase-promoting complex	ISM	GOs from InterProScan
BP	GO:0007346	regulation of mitotic cell cycle	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0010564	regulation of cell cycle process	None	Extended
BP	GO:0030071	regulation of mitotic metaphase/anaphase transition	ISM	GOs from InterProScan
CC	GO:0031461	cullin-RING ubiquitin ligase complex	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033043	regulation of organelle organization	None	Extended
BP	GO:0033044	regulation of chromosome organization	None	Extended
BP	GO:0033045	regulation of sister chromatid segregation	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051726	regulation of cell cycle	None	Extended
BP	GO:0051983	regulation of chromosome segregation	None	Extended
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
BP	GO:1901987	regulation of cell cycle phase transition	None	Extended
BP	GO:1901990	regulation of mitotic cell cycle phase transition	None	Extended
BP	GO:1902099	regulation of metaphase/anaphase transition of cell cycle	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR011990	TPR-like_helical_dom_sf	Gene3D	145	329
IPR011990	TPR-like_helical_dom_sf	Gene3D	330	387
IPR011990	TPR-like_helical_dom_sf	Gene3D	5	62
IPR019734	TPR_repeat	SMART	450	483
IPR019734	TPR_repeat	SMART	373	408
IPR019734	TPR_repeat	SMART	285	318
IPR019734	TPR_repeat	SMART	339	372
IPR019734	TPR_repeat	SMART	409	442
IPR007192	APC8	Pfam	8	49
IPR011990	TPR-like_helical_dom_sf	Gene3D	388	496
IPR019734	TPR_repeat	ProSiteProfiles	339	372

No CAZYmes available for this sequence

External Links

No external refs found!

LOC_Os06g46540.1

Expression Profile

Co-expression Networks

Functional Annotation