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  5. LOC_Os06g47890.2

LOC_Os06g47890.2


Description : Galactose oxidase/kelch repeat superfamily protein


Gene families : OG_01_0000595 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000595_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os06g47890.2
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os06g47890.2
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_367
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_138


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011498 Kelch_2 Pfam 538 585
IPR000014 PAS ProSiteProfiles 72 127
IPR000014 PAS TIGRFAM 72 166
IPR001810 F-box_dom Pfam 224 264
IPR011043 Gal_Oxase/kelch_b-propeller SUPERFAMILY 300 616
IPR035965 PAS-like_dom_sf SUPERFAMILY 57 167
IPR000014 PAS CDD 57 166
IPR000014 PAS Pfam 61 166
IPR015915 Kelch-typ_b-propeller Gene3D 530 630
IPR015915 Kelch-typ_b-propeller Gene3D 290 529
IPR036047 F-box-like_dom_sf SUPERFAMILY 214 277

No CAZYmes available for this sequence

No external refs found!