LOC_Os06g48040.1

Description : RING/U-box superfamily protein

Gene families : OG_01_0009269 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009269_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os06g48040.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os06g48040.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_384
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_109

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016755	aminoacyltransferase activity	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
MF	GO:0061630	ubiquitin protein ligase activity	ISM	GOs from InterProScan
MF	GO:0061659	ubiquitin-like protein ligase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001841	Znf_RING	SMART	525	565
IPR045191	MBR1/2-like	PANTHER	1	576
IPR001841	Znf_RING	Pfam	524	566
IPR001841	Znf_RING	ProSiteProfiles	525	566
IPR013083	Znf_RING/FYVE/PHD	Gene3D	502	572

No CAZYmes available for this sequence

External Links

No external refs found!