1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os06g48160.1

LOC_Os06g48160.1


Description : Xyloglucan endotransglucosylase/hydrolase family protein


Gene families : OG_01_0000345 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000345_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os06g48160.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os06g48160.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_49
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_46


Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISM GOs from InterProScan
CC GO:0005618 cell wall ISM GOs from InterProScan
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
BP GO:0006073 obsolete cellular glucan metabolic process ISM GOs from InterProScan
BP GO:0010411 xyloglucan metabolic process ISM GOs from InterProScan
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity ISM GOs from InterProScan
BP GO:0042546 cell wall biogenesis ISM GOs from InterProScan
CC GO:0048046 apoplast ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR008263 GH16_AS ProSitePatterns 97 107
IPR010713 XET_C Pfam 247 290
IPR016455 XTH CDD 20 290
IPR000757 GH16 Pfam 26 204
IPR000757 GH16 ProSiteProfiles 18 211
IPR016455 XTH PIRSF 1 293
IPR013320 ConA-like_dom_sf SUPERFAMILY 29 292
IPR044791 Beta-glucanase/XTH PANTHER 3 293

No CAZYmes available for this sequence

No external refs found!