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  5. LOC_Os06g48350.1

LOC_Os06g48350.1


Description : Translation initiation factor IF2/IF5


Gene families : OG_01_0007546 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007546_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os06g48350.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os06g48350.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_334
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_214


Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
BP GO:0006413 translational initiation ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR003307 W2_domain SMART 360 446
IPR003307 W2_domain Pfam 373 450
IPR003307 W2_domain ProSiteProfiles 295 450
IPR045196 IF2/IF5 PANTHER 1 449
IPR002735 Transl_init_fac_IF2/IF5_dom SMART 15 129
IPR002735 Transl_init_fac_IF2/IF5_dom Pfam 11 127
IPR016024 ARM-type_fold SUPERFAMILY 299 444
IPR016190 Transl_init_fac_IF2/IF5_Zn-bd SUPERFAMILY 98 133
IPR016189 Transl_init_fac_IF2/IF5_N SUPERFAMILY 10 101

No CAZYmes available for this sequence

No external refs found!