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  5. LOC_Os06g48510.1

LOC_Os06g48510.1


Description : choline monooxygenase, putative (CMO-like)


Gene families : OG_01_0002358 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002358_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os06g48510.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os06g48510.1 No neighbors in network
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_266


Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding ISM GOs from InterProScan
BP GO:0044237 cellular metabolic process ISM GOs from InterProScan
MF GO:0051537 2 iron, 2 sulfur cluster binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036922 Rieske_2Fe-2S_sf Gene3D 83 205
IPR001663 Rng_hydr_dOase-A PANTHER 40 407
IPR017941 Rieske_2Fe-2S Pfam 85 169
IPR001663 Rng_hydr_dOase-A PRINTS 99 114
IPR001663 Rng_hydr_dOase-A PRINTS 226 248
IPR001663 Rng_hydr_dOase-A PRINTS 140 160
IPR001663 Rng_hydr_dOase-A PRINTS 69 94
IPR015879 Ring_hydroxy_dOase_asu_C_dom Pfam 233 404
IPR017941 Rieske_2Fe-2S ProSiteProfiles 85 192
IPR036922 Rieske_2Fe-2S_sf SUPERFAMILY 50 195

No CAZYmes available for this sequence

No external refs found!