LOC_Os06g48940.1

Description : arabinose kinase

Gene families : OG_01_0001289 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001289_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os06g48940.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os06g48940.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_192
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_43

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR006204	GHMP_kinase_N_dom	Pfam	635	701
IPR012369	Galk_glycosyltransferase	PIRSF	6	989
IPR020568	Ribosomal_Su5_D2-typ_SF	SUPERFAMILY	497	716
IPR014721	Ribsml_uS5_D2-typ_fold_subgr	Gene3D	492	729
IPR036554	GHMP_kinase_C_sf	SUPERFAMILY	726	967
IPR036554	GHMP_kinase_C_sf	Gene3D	831	963

HMM Family	HMM Length	Query Length	e-Value	Query Start	Query End
GT28	157	995	2.3e-05	256	314

External Links

No external refs found!